ESTScan (version 1)
FYI:
ESTScan version 2 is available
Usage:
Paste a DNA sequence, ID or AC (ex. X91349) or a Unigene cluster ID (ex. Hs.9194), select the format, the species and the options and click the "Run ESTScan" button.
Please cite:
Iseli C, Jongeneel CV, Bucher P. (1999)
ESTScan: a program for detecting, evaluating, and reconstructing potential coding regions in EST sequences.
Proc Int Conf Intell Syst Mol Biol.
138-48.
See ESTScan
help page
for explanations.
Make sure that the format button shows the correct format.
Select format:
Plain Text
EMBL ID or AC
EST ID or AC
Unigene cluster
Select species:
Human (or any mammalian)
Yeast (S.cerevisiae)
Query title (option)
Paste your sequence here:
(or ID or accession number)
Options:
Insertion/Deletion penalty
(default: -50)
Expected false positive rate
0.1 %
1 % (default)
5 %
10 %
Output
DNA (CDS)
full DNA
Protein