SIB GeneMatcher server thanks to
Usage: Choose the the suitable GeneMatcher program and database for your query sequence. Changing the GenMatcher parameters and output parameters is optional.
Paste your sequence in one of the supported formats into the sequence field below and press the "Run GeneMatcher" button.
Make sure that the format button (next to the sequence field) shows the correct format .
    BLAST vs FDF (Smith-Waterman) or choosing the suitable algorithm.
 
Please select the program:
(FDF help file)
Please select the protein database:
General FDF parameters:
(See FDF help file for explanation)
xnu filter on/off (PROT)
Select matrix (M)
seg filter on/off (PROT)
Select format
Query title (option)
Paste your sequence here:
(or ID or accession number)
Regulating output:
 
 
Threshold (S) : filter to exclude low scoring results
 
Descriptions (V): Nr of one-line descriptions
 
Alignments (B): Nr of aligned results